viewport 750,475 hide # SS copied from DSSP! # alter A/1:500/, ss='L' alter A/5:12/, ss='S' alter A/14:19/, ss='H' alter A/37:43/, ss='H' alter A/45:54/, ss='S' alter A/67:79/, ss='H' alter A/88:95/, ss='S' alter A/96:100/, ss='H' alter A/106:113/, ss='H' alter A/116:134/, ss='H' alter A/137:142/, ss='S' alter A/150:171/, ss='H' alter A/179:186/, ss='S' alter A/188:192/, ss='H' alter A/198:203/, ss='H' alter A/207:212/, ss='S' alter A/251:258/, ss='H' alter A/266:275/, ss='H' alter A/284:290/, ss='S' alter A/291:297/, ss='S' alter A/328:333/, ss='H' alter A/338:341/, ss='S' alter A/341:349/, ss='H' alter A/354:360/, ss='S' alter A/364:370/, ss='S' alter A/374:378/, ss='S' alter A/381:394/, ss='H' alter A/398:403/, ss='S' alter A/412:423/, ss='H' alter A/466:470/, ss='S' alter A/472:477/, ss='S' alter A/491:497/, ss='S' color grey, (name C*) color marine, (ss s and (resi 3:290 or resi 381:426)) color firebrick, (ss h and resi 37:43) color firebrick, (ss h and resi 67:79) color firebrick, (ss h and resi 116:134) color firebrick, (ss h and resi 150:171) color firebrick, (ss h and resi 198:203) color firebrick, (ss h and resi 266:275) color firebrick, (ss h and resi 381:394) color firebrick, (ss h and resi 412:423) color yellow, (resi 291:380 and name CA) color green, (resi 466:500 and name CA) color yellow, (name S*) color red, (name O*) color blue, (name N*) set cartoon_smooth_loops = 0 set cartoon_fancy_helices = 1 set cartoon_fancy_sheets = 1 cartoon automatic show cartoon color grey, (name C* and not name CA) #color green, (name C* and not name CA and resi 12,407,292) #color green, (name C* and not name CA and resi 142,144,212,214,215,403) #color green, (name C* and not name CA and resi 97,145,294,215) #color green, (name C* and not name CA and resi 191,220) #color green, (name C* and not name CA and resi 221,190) show sticks, (not name N,C,O and resi 12,407,292) show sticks, (not name N,C,O and resi 142,144,212,214,215,403) show sticks, (not name N,C,O and resi 97,145,294,215) show sticks, (not name N,C,O and resi 191,220) show sticks, (not name N,C,O and resi 221,190) color purple, (name C* and resn NAG) show nb_spheres, (chain Z and resi 193) color orange, (chain Z and resi 193) show sticks, (resn NAG) unbond (resn nag), (not resn nag) unbond (name N2), (not name C2,C7) unbond (name C7), (not name N2,C8,O7) unbond (name O7), (not name C7) unbond (resi 142 and name OD*), (resi 142 and not name CG) set stick_radius=0.2 #-1 dist d3 = ( resi 1500 and name O3), ( resi 97 and name CA) color yellow, d3 cmd.hide("labels" ,"d3") dist d4 = ( resi 1500 and name N2), ( resi 142 and name OD2) color yellow, d4 cmd.hide("labels" ,"d4") dist d5 = ( resi 1501 and name O4), ( resi 144 and name OE1) color yellow, d5 cmd.hide("labels" ,"d5") dist d6 = ( resi 1500 and name O7), ( resi 214 and name OH) color yellow, d6 cmd.hide("labels" ,"d6") dist d7 = ( resi 1500 and name O6), ( resi 215 and name OD2) color yellow, d7 cmd.hide("labels" ,"d7") #dist d7b = ( resi 193 and chain Z), ( resi 144 and name OE1) #color yellow, d7b #cmd.hide("labels" ,"d7b") set_view (\ 0.643992543, -0.208856344, -0.735968769,\ 0.266138107, -0.840761125, 0.471474260,\ -0.717242956, -0.499493271, -0.485862166,\ 0.000000000, 0.346239269, -45.873825073,\ 19.118036270, 41.044811249, 100.272972107,\ 33.740634918, 58.007015228, 0.000000000 ) set antialias=1 set line_smooth = 1.00000 set depth_cue = 1 set specular = 1.00000 set surface_quality = 1.00000 set stick_quality = 25.00000 set sphere_quality = 2.00000 set cartoon_sampling = 14.00000 set ribbon_sampling = 10.00000 set ray_trace_fog = 1 rebuild #ray